Now, where did the weirdness come from here. Well, to me it seems clear that really it came from the fact that the reals can be built out of a bunch of shifted rational numbers, right?
I think the weirdness comes from trying to assign a real number measure, instead of allowing infinitesimals. I’ve never understood why infinite sets are readily accepted, but infinitesimal/infinite measures are not.
EDIT: To explain my reasoning more, suppose you were Pythagoras and your student came to you and drew a geometric diagram with lengths not in a ratio of whole numbers. You have two options here:
You can declare that not all lengths are commensurate. Not every ratio of lengths results in a number.
You can extend your number system.
Finding the right extension is not an easy problem. Should we extend the numbers to allow square roots (including nesting), but nothing else? This suffices for geometry. But it’s actually more useful to use something like a Cauchy sequence completion: Let any sequence of rational numbers that gets closer and closer together “converge” to a real number. Historically, extending your system of numbers has been what has worked.
When we come across an “immeasurable” set, this to me feels like the same kind of problem. Perhaps we don’t yet have a general consensus on what the “right” extension is to infinitesimals/infinities. However, there clearly are some sets with infinitesimal measure, like the set you constructed. We should figure out a way to give that set infinitesimal measure, not just call it immeasurable.
You say that “Perhaps for several millennia, [rot didn’t exist]” and then provide a date about 3300 years ago about when rot might potentially have began. You also say that several millennia is a “very, very long time”. A millennium is 1,000 years. Do you think that life has only existed on Earth for a few thousand years?